BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A01SP1|AL426442
(790 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1789 1253 0.0
>3x_Contig1789
Length = 30977
Score = 1253 bits (585), Expect = 0.0
Identities = 688/781 (88%)
Strand = Plus / Plus
Query: 1 gtctggctaggyagggcaataggaaagcagatatttcctacgcgggcgtctacgtatttc 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6263 gtctggctaggcagggcaataggaaagcagatatttcctacgcgggcgtctacgtatttc 6322
Query: 61 ttgagtattatttttcattatccctcgaatagtatggaagaatcagaatcgtataagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6323 ttgagtattatttttcattatccctcgaatagtatggaagaatcagaatcgtataagaat 6382
Query: 121 agagagaatcaagaatcacagagagtttgcattgtaagaagagcgtgttactggaacaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6383 agagagaatcaagaatcacagagagtttgcattgtaagaagagcgtgttactggaacaat 6442
Query: 181 tgtttgaggttttcctggtgtatacaacagacctatgagttttagggtacgctagacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6443 tgtttgaggttttcctggtgtatacaacagacctatgagttttagggtacgctagacaaa 6502
Query: 241 agatcagtttctkatttktkggctttttatactttcgcttgttttatatttktttkcttc 300
|||||||||||| |||| | ||| ||||||||||||||||||||||||||| ||| ||||
Sbjct: 6503 agatcagtttctgatttgtgggcgttttatactttcgcttgttttatatttgtttgcttc 6562
Query: 301 cmgatcttktaccmkatcmkstkskmmctmmmtttkgtttcmttcmmmgmmmmgmgtmgm 360
| ||||| |||| ||| | || ||| ||||| ||| | | || |
Sbjct: 6563 cagatctggtaccagatcagctgcgaactaaatttggtttcattcaaagaaaagagtaga 6622
Query: 361 gggmmcmmgmggmtmctmttcmgctgmgmtmctmmcmgattktktttmgmctmamctgtg 420
||| | | || | || ||| |||| | | || | |||| | ||| | || | |||||
Sbjct: 6623 gggaacaagaggatactattcagctgagatactaacagattgtgtttagactaaactgtg 6682
Query: 421 cttttttttttttctctcccmgtccctgttttcgtctggtgmttmmcctttgmmmgctmt 480
||||||||||||||||||| |||||||||||||||||||| || |||||| ||| |
Sbjct: 6683 cttttttttttttctctccaagtccctgttttcgtctggtgattaacctttgaaagctat 6742
Query: 481 tctttcctgaagaagatcttataatakamtcmmagattcmagtattthkgggaagssgga 540
|||||||||||||||||||||||||| | || |||||| ||||||| |||||| |||
Sbjct: 6743 tctttcctgaagaagatcttataatagaatcaaagattcaagtatttaggggaagccgga 6802
Query: 541 gtggagmcataactmgtggataatkcmattccmtcmtcmmcccccmctgtcmgttamctc 600
|| ||| ||||||| ||||||||| | ||||| || || |||| ||||| |||| |||
Sbjct: 6803 gtcgagacataactagtggataatgcaattccatcatcaaccccaactgtcagttaactc 6862
Query: 601 tgttcmmtctgtcattgagccagtgactccgccgttgggccagatgaactctaagaatma 660
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6863 tgttcaatctgtcattgagccagtgactccgccgttgggccagatgaactctaagaataa 6922
Query: 661 ccmtcmmagaacacattctttggatttgtctggattcaaccaattcatttccaacacttc 720
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6923 ccatcaaagaacacattctttggatttgtctggattcaaccaattcatttccaacacttc 6982
Query: 721 tcctctgaatgtcaatacaatgtcaccgctgagtacgatttctgccacgacatccgtgtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6983 tcctctgaatgtcaatacaatgtcaccgctgagtacgatttctgccacgacatccgtgtc 7042
Query: 781 a 781
|
Sbjct: 7043 a 7043
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.48 0.728 1.40
Gapped
Lambda K H
1.48 0.728 1.40
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9917
Number of Sequences: 1807
Number of extensions: 9917
Number of successful extensions: 236
Number of sequences better than 1.0e-20: 1
length of query: 790
length of database: 10,358,551
effective HSP length: 15
effective length of query: 775
effective length of database: 10,331,446
effective search space: 8006870650
effective search space used: 8006870650
T: 0
A: 40
X1: 5 (10.7 bits)
X2: 14 (30.0 bits)
S1: 11 (24.0 bits)
S2: 47 (101.1 bits)